J.I. Spoel: search on Z-Library

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1

Thiamin Function, Metabolism, Uptake, and Transport

Manzetti, Sergio, Zhang, Jin, van der Spoel, David

Journal:

Year:

2014

Language:

english

File:

PDF, 4.46 MB

english, 2014

2

Teachersâ online teaching expectations and experiences during the Covid19-pandemic in the Netherlands

van der Spoel, Irene, Noroozi, Omid, Schuurink, Ellen, van Ginkel, Stan

Journal:

European Journal of Teacher Education

Year:

2020

File:

PDF, 516 KB

2020

3

GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit

Pronk, S., Pall, S., Schulz, R., Larsson, P., Bjelkmar, P., Apostolov, R., Shirts, M. R., Smith, J. C., Kasson, P. M., van der Spoel, D., Hess, B., Lindahl, E.

Journal:

Year:

2013

Language:

english

File:

PDF, 786 KB

english, 2013

4

Water Determines the Structure and Dynamics of Proteins

Bellissent-Funel, Marie-Claire, Hassanali, Ali, Havenith, Martina, Henchman, Richard, Pohl, Peter, Sterpone, Fabio, van der Spoel, David, Xu, Yao, Garcia, Angel E

Journal:

Chemical Reviews

Year:

2016

Language:

english

File:

PDF, 6.48 MB

english, 2016

5

GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

Hess, Berk, Kutzner, Carsten, van der Spoel, David, Lindahl, Erik

Journal:

Journal of Chemical Theory and Computation

Year:

2008

Language:

english

File:

PDF, 383 KB

english, 2008

6

The science of bodily rhetoric in Gilbert Austin's Chironomia

Spoel, Philippa M.

Journal:

Rhetoric Society Quarterly

Year:

1998

Language:

english

File:

PDF, 1.35 MB

english, 1998

7

How do plants achieve immunity? Defence without specialized immune cells

Spoel, Steven H., Dong, Xinnian

Journal:

Nature Reviews Immunology

Year:

2012

Language:

english

File:

PDF, 1.09 MB

english, 2012

8

GROMACS: Fast, flexible, and free

David Van Der Spoel, Erik Lindahl, Berk Hess, Gerrit Groenhof, Alan E. Mark, Herman J. C. Berendsen

Journal:

Journal of Computational Chemistry

Year:

2005

Language:

english

File:

PDF, 338 KB

english, 2005

9

GROMACS 3.0: a package for molecular simulation and trajectory analysis

Erik Lindahl, Berk Hess, David van der Spoel

Journal:

Journal of Molecular Modeling

Year:

2001

Language:

english

File:

PDF, 109 KB

english, 2001

10

Comparison of Implicit and Explicit Solvent Models for the Calculation of Solvation Free Energy in Organic Solvents

Zhang, Jin, Zhang, Haiyang, Wu, Tao, Wang, Qi, van der Spoel, David

Journal:

Journal of Chemical Theory and Computation

Year:

2017

Language:

english

File:

PDF, 1.93 MB

english, 2017

11

Analytical Model for Predicting Thermal Bridge Effects due to Vacuum Insulation Panel Barrier Envelopes

Martin Tenpierik, Wim van der Spoel, Hans Cauberg

Journal:

Year:

2008

Language:

english

File:

PDF, 211 KB

english, 2008

12

NPR3 and NPR4 are receptors for the immune signal salicylic acid in plants

Fu, Zheng Qing, Yan, Shunping, Saleh, Abdelaty, Wang, Wei, Ruble, James, Oka, Nodoka, Mohan, Rajinikanth, Spoel, Steven H., Tada, Yasuomi, Zheng, Ning, Dong, Xinnian

Journal:

Year:

2012

Language:

english

File:

PDF, 797 KB

english, 2012

13

GROMACS: A message-passing parallel molecular dynamics implementation

H.J.C. Berendsen, D. van der Spoel, R. van Drunen

Journal:

Computer Physics Communications

Year:

1995

Language:

english

File:

PDF, 844 KB

english, 1995

14

Predictive analytics for truck arrival time estimation: a field study at a European distribution center

van der Spoel, Sjoerd, Amrit, Chintan, van Hillegersberg, Jos

Journal:

International Journal of Production Research

Year:

2015

Language:

english

File:

PDF, 1.69 MB

english, 2015

15

An Analytical Model for Calculating Thermal Bridge Effects in High Performance Building Enclosure

Tenpierik, M., van Der Spoel, W., Cauberg, H.

Journal:

Journal of Building Physics

Year:

2008

Language:

english

File:

PDF, 448 KB

english, 2008

16

Proteasome-associated HECT-type ubiquitin ligase activity is required for plant immunity

Furniss, James J., Grey, Heather, Wang, Zhishuo, Nomoto, Mika, Jackson, Lorna, Tada, Yasuomi, Spoel, Steven H., Shan, Libo

Journal:

Year:

2018

Language:

english

File:

PDF, 5.62 MB

english, 2018

17

Post-translational protein modification as a tool for transcription reprogramming

Steven H. Spoel, Yasuomi Tada, Gary J. Loake

Journal:

New Phytologist

Year:

2010

Language:

english

File:

PDF, 494 KB

english, 2010

18

The current status of scrap metal recycling

Journal:

JOM Journal of the Minerals, Metals and Materials Society

Year:

1990

Language:

english

File:

PDF, 885 KB

english, 1990

19

Plant Immunity Requires Conformational Charges of NPR1 via S-Nitrosylation and Thioredoxins

Tada, Y., Spoel, S. H., Pajerowska-Mukhtar, K., Mou, Z., Song, J., Wang, C., Zuo, J., Dong, X.

Journal:

Year:

2008

Language:

english

File:

PDF, 491 KB

english, 2008

20

Unusual swimming mechanism in Calycopsis borchgrevinki (Hydrozoa)

van der Spoel, S.

Journal:

Journal of Plankton Research

Year:

1992

Language:

english

File:

PDF, 854 KB

english, 1992

21

The cell biology of disease: Lysosomal storage disorders: The cellular impact of lysosomal dysfunction

Platt, F. M., Boland, B., van der Spoel, A. C.

Journal:

The Journal of Cell Biology

Year:

2012

Language:

english

File:

PDF, 1.78 MB

english, 2012

22

Regulation of tradeoffs between plant defenses against pathogens with different lifestyles

Spoel, S. H., Johnson, J. S., Dong, X.

Journal:

Proceedings of the National Academy of Sciences

Year:

2007

Language:

english

File:

PDF, 763 KB

english, 2007

23

How to build an effective research network: lessons from two decades of the GARNet plant science community

Parry, Geraint, Benitez-Alfonso, Yoselin, Gibbs, Daniel J, Grant, Murray, Harper, Andrea, Harrison, C Jill, Kaiserli, Eirini, Leonelli, Sabina, May, Sean, McKim, Sarah, Spoel, Steven, Turnbull, Colin,

Journal:

Journal of Experimental Botany

Year:

2020

File:

PDF, 732 KB

2020

24

Neostigmine resolves critical illness-related colonic ileus in intensive care patients with multiple organ failure – a prospective, double-blind, placebo-controlled trial

J. van der Spoel, H. Oudemans-van Straaten, C. Stoutenbeek, R. Bosman, D. Zandstra

Journal:

Intensive Care Medicine

Year:

2001

Language:

english

File:

PDF, 88 KB

english, 2001

25

Fullerenes toxicity and electronic properties

Sergio, Manzetti, Behzadi, Hadi, Otto, Andersen, Spoel, David

Journal:

Environmental Chemistry Letters

Year:

2013

Language:

english

File:

PDF, 557 KB

english, 2013

26

NPR1 promotes its own and target gene expression in plant defense by recruiting CDK8

Chen, Jian, Mohan, Rajinikanth, Zhang, Yuqiang, Li, Min, Chen, Huan, Palmer, Ian Arthur, Chang, Ming, Qi, Guang, Spoel, Steven H, Mengiste, Tesfaye, Wang, Daowen, Liu, Fengquan, Fu, Zheng Qing

Journal:

PLANT PHYSIOLOGY

Year:

2019

Language:

english

File:

PDF, 4.69 MB

english, 2019

27

Thermodynamics of Hydrogen Bonding in Hydrophilic and Hydrophobic Media

van der Spoel, David, van Maaren, Paul J., Larsson, Per, Tîmneanu, Nicuşor

Journal:

Journal of Physical Chemistry B

Year:

2006

Language:

english

File:

PDF, 173 KB

english, 2006

28

Atomistic Simulation of Protein Encapsulation in Metal–Organic Frameworks

Zhang, Haiyang, Lv, Yongqin, Tan, Tianwei, van der Spoel, David

Journal:

Journal of Physical Chemistry B

Year:

2016

Language:

english

File:

PDF, 3.39 MB

english, 2016

29

Phase-Transferable Force Field for Alkali Halides

Walz, Marie-Madeleine, Ghahremnapour, Mohammad Mehdi, van Maaren, Paul J., van der Spoel, David

Journal:

Journal of Chemical Theory and Computation

Year:

2018

Language:

english

File:

PDF, 2.30 MB

english, 2018

30

Redox-based protein modifications: the missing link in plant immune signalling

Steven H Spoel, Gary J Loake

Journal:

Current Opinion in Plant Biology

Year:

2011

Language:

english

File:

PDF, 344 KB

english, 2011

31

Chemical Properties, Environmental Fate, and Degradation of Seven Classes of Pollutants

Manzetti, Sergio, van der Spoel, E. Roos, van der Spoel, David

Journal:

Chemical Research in Toxicology

Year:

2014

Language:

english

File:

PDF, 5.33 MB

english, 2014

32

The measurement of the diffusion coefficient of water in paints and polymers from their swelling by using an interferometric technique

E.L.J. Goossens, A.J.J. van der Zanden, H.L.M. Wijen, W.H. van der Spoel

Journal:

Progress in Organic Coatings (Elsevier)

Year:

2003

Language:

english

File:

PDF, 123 KB

english, 2003

33

GROMACS molecule & liquid database

van der Spoel, D., van Maaren, P. J., Caleman, C.

Journal:

Year:

2012

Language:

english

File:

PDF, 164 KB

english, 2012

34

Evaluation of Generalized Born Models for Large Scale Affinity Prediction of Cyclodextrin Host−Guest Complexes

Zhang, Haiyang, Yin, Chunhua, Yan, Hai, van der Spoel, David

Journal:

Journal of Chemical Information and Modeling

Year:

2016

Language:

english

File:

PDF, 1.33 MB

english, 2016

35

A sleigh ride through the SNO: regulation of plant immune function by protein S-nitrosylation

Manda Yu, Byung-Wook Yun, Steven H Spoel, Gary J Loake

Journal:

Current Opinion in Plant Biology

Year:

2012

Language:

english

File:

PDF, 477 KB

english, 2012

36

GROMACS—the road ahead

David van der Spoel, Berk Hess

Journal:

Wiley Interdisciplinary Reviews: Computational Molecular Science

Year:

2011

Language:

english

File:

PDF, 123 KB

english, 2011

37

Lack of enzyme activity in GBA2 mutants associated with hereditary spastic paraplegia/cerebellar ataxia (SPG46)

Sultana, Saki, Reichbauer, Jennifer, Schüle, Rebecca, Mochel, Fanny, Synofzik, Matthis, van der Spoel, Aarnoud C.

Journal:

Biochemical and Biophysical Research Communications

Year:

2015

Language:

english

File:

PDF, 823 KB

english, 2015

38

Molecular characterization of circulating tumor cells in large quantities of contaminating leukocytes by a multiplex real-time PCR

Anieta M. Sieuwerts, Jaco Kraan, Joan Bolt-de Vries, Petra van der Spoel, Bianca Mostert, John W. M. Martens, Jan-Willem Gratama, Stefan Sleijfer, John A. Foekens

Journal:

Breast Cancer Research and Treatment

Year:

2009

Language:

english

File:

PDF, 556 KB

english, 2009

39

Circadian Redox Signaling in Plant Immunity and Abiotic Stress

Spoel, Steven H., van Ooijen, Gerben

Journal:

Antioxidants & Redox Signaling

Year:

2014

Language:

english

File:

PDF, 546 KB

english, 2014

40

Julian on the Sons of Fausta

Barnes, T. D., Spoel, J. Vander

Journal:

Year:

1984

Language:

english

File:

PDF, 550 KB

english, 1984

41

Preserving Wilderness or Protecting Homelands? Intersections and Divergences in Activist Discourses About Mining in Ontario’s Far North

Spoel, Philippa

Journal:

Environmental Communication / A Journal of Nature and Culture

Year:

2018

Language:

english

File:

PDF, 656 KB

english, 2018

42

Large-scale calculations of gas phase thermochemistry: Enthalpy of formation, standard entropy, and heat capacity

Ghahremanpour, Mohammad M., van Maaren, Paul J., Ditz, Jonas C., Lindh, Roland, van der Spoel, David

Journal:

The Journal of Chemical Physics

Year:

2016

Language:

english

File:

PDF, 541 KB

english, 2016

43

Systematic design of biomolecular force fields

van der Spoel, David

Journal:

Current Opinion in Structural Biology

Year:

2021

File:

PDF, 891 KB

2021

44

Orchestrating the proteome with post-translational modifications

Spoel, Steven H

Journal:

Journal of Experimental Botany

Year:

2018

Language:

english

File:

PDF, 433 KB

english, 2018

45

S-nitrosothiols regulate nitric oxide production and storage in plants through the nitrogen assimilation pathway

Frungillo, Lucas, Skelly, Michael J., Loake, Gary J., Spoel, Steven H., Salgado, Ione

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 1.01 MB

english, 2014

46

Titelbild: Picosecond Melting of Ice by an Infrared Laser Pulse: A Simulation Study (Angew. Chem. 8/2008)

Carl Caleman, David van der Spoel

Journal:

Angewandte Chemie

Year:

2008

Language:

german

File:

PDF, 857 KB

german, 2008

47

A theoretical study of repeating sequence in HRP II: A combination of molecular dynamics simulations and 17O quadrupole coupling tensors

Hadi Behzadi, Mehdi D. Esrafili, David van der spoel, Nasser L. Hadipour, Gholamabbas Parsafar

Journal:

Biophysical Chemistry

Year:

2008

Language:

english

File:

PDF, 514 KB

english, 2008

48

Molecular Dynamics Simulations of Dodecylphosphocholine Micelles at Three Different Aggregate Sizes: Micellar Structure and Chain Relaxation

Tieleman, D. P., van der Spoel, D., Berendsen, H. J. C.

Journal:

Journal of Physical Chemistry B

Year:

2000

Language:

english

File:

PDF, 307 KB

english, 2000

49

Selective Protein Denitrosylation Activity of Thioredoxin-h5 Modulates Plant Immunity

Kneeshaw, Sophie, Gelineau, Silvère, Tada, Yasuomi, Loake, Gary J., Spoel, Steven H.

Journal:

Year:

2014

Language:

english

File:

PDF, 1.86 MB

english, 2014

50

[Radioactivity in the Environment] The Natural Radiation Environment VII: VIIth Int. Symp. On the NRE Volume 7 || Sensitivity analysis of an improved method for measuring the radon diffusion coefficient of porous materials

van der Spoel, W.H.

Year:

2005

Language:

english

File:

PDF, 72 KB

english, 2005

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